PHATRDRAFT_8926 phenylalanyl-trnaalpha subunit (pheS)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_8926	chr_1	phenylalanyl-trnaalpha subunit (pheS)	1971725	1972771	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0232

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0051	0.31	15000 29000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PheRS_alpha_core		Phenylalanyl-tRNA synthetase (PheRS) alpha chain catalytic core domain. PheRS belongs to class II...	cl00268	334.899	8.04E-115	122 - 344	specific	238277
class_II_aaRS-like_core superfamily		Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA...	-	334.899	8.04E-115	122 - 344	superfamily	260313
Phe_tRNA-synt_N superfamily		Aminoacyl tRNA synthetase class II, N-terminal domain; Aminoacyl tRNA synthetase class II, N-...	-	73.3465	1.27E-16	31 - 101	superfamily	111764
Phe_tRNA-synt_N superfamily		Aminoacyl tRNA synthetase class II, N-terminal domain; Aminoacyl tRNA synthetase class II, N-...	-	73.3465	1.27E-16	31 - 101	superfamily	111764
pheS		phenylalanyl-tRNA synthetase subunit alpha; Validated	-	511.954	0	15 - 349	multi-dom	234780

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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