PHATRDRAFT_9185 novel proteinvertebrate gtp binding protein 2 (GTPBP1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_9185 chr_1 novel proteinvertebrate gtp binding protein 2 (GTPBP1) 374987 377074 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0378

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0144
 0.19

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GTPBP_II Domain II of the GP-1 family of GTPase. This group includes proteins similar to GTPBP1 and GTPBP2.... cl02787 90.7418 5.44E-22 345 - 434 specific 239665
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 90.7418 5.44E-22 345 - 434 superfamily 261449
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 221.781 2.64E-68 110 - 334 superfamily 266525
Translation_factor_III superfamily Domain III of Elongation factor (EF) Tu (EF-TU) and EF-G. Elongation factors (EF) EF-Tu and EF-G... - 106.943 7.07E-28 439 - 530 superfamily 261448
GTPBP1 GTPase [General function prediction only] - 359.09 4.36E-117 2 - 530 multi-dom 227583

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
13117 Not available 276320 256773 460988 Cre03.g159650.t1.2 Not available 497084

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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