PHATRDRAFT_9258 1-deoxy-d-xylulose 5-phosphate reductoisomerase (PRK05447)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_9258 chr_1 1-deoxy-d-xylulose 5-phosphate reductoisomerase (PRK05447) 2305187 2306498 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0175

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0253
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DXPR_C superfamily DXP reductoisomerase C-terminal domain; This is the C-terminal domain of the 1-deoxy-D-xylulose-5-... - 183.397 1.54E-56 265 - 387 superfamily 257629
DXPR_C superfamily DXP reductoisomerase C-terminal domain; This is the C-terminal domain of the 1-deoxy-D-xylulose-5-... - 183.397 1.54E-56 265 - 387 superfamily 257629
DXP_reductoisom superfamily 1-deoxy-D-xylulose 5-phosphate reductoisomerase; This is a family of 1-deoxy-D-xylulose 5-phosphate... - 174.228 7.94E-53 1 - 129 superfamily 251461
DXP_reductoisom superfamily 1-deoxy-D-xylulose 5-phosphate reductoisomerase; This is a family of 1-deoxy-D-xylulose 5-phosphate... - 174.228 7.94E-53 1 - 129 superfamily 251461
DXP_redisom_C superfamily 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; This domain is found to the C-terminus... - 157.645 3.39E-47 143 - 233 superfamily 254800
DXP_redisom_C superfamily 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; This domain is found to the C-terminus... - 157.645 3.39E-47 143 - 233 superfamily 254800
PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional - 591.283 0 1 - 394 multi-dom 235472

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
10943 Not available 179077 260575 68547 Cre12.g546050.t1.2 AT5G62790.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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