10115 NPD_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10115 chr_15 NPD_like 302776 304049 - NPD_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7451878 Thaps10115.1, Thaps10115.3, Thaps10115.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0196

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0037
 0.54

Most Highly Correlated Transcripts

9514

hypothetical protein
0.8931

7103

GRASP55_65
0.8924

32316

Peptidase_C97
0.8908

22785

DUF336
0.8903

13448

Sec1
0.8831

12899

AAA
0.8751

8500

PRP38 superfamily
0.8741

8287

hypothetical protein
0.8733

6458

Ssu72 superfamily
0.8719

5066

hypothetical protein
0.8709

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes... cl17186 228.137 1.19E-72 16 - 241 specific 240081
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 228.137 1.19E-72 16 - 241 superfamily 266538
COG2070 Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only] - 212.574 1.75E-65 5 - 344 multi-dom 224981

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43560 PHATRDRAFT_43560 257778 218971 452061 Not available AT5G64250.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0016491 GO:0003938 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0003938

IMP dehydrogenase activity

Details: 
Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+.
GO Category: 
MF

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