10146 Fra10Ac1 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10146	chr_15	Fra10Ac1 superfamily	392356	393487	-	Fra10Ac1 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451892	Thaps10146.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0215

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0042	0.43

Most Highly Correlated Transcripts

3204 hypothetical protein 0.8981	8414 NA 0.8972	7696 2_5_RNA_ligase2 0.896	6757 hypothetical protein 0.8952	263536 P4Hc 0.8857	8773 ANK 0.8852
21713 UbiH 0.8802	5958 hypothetical protein 0.8791	33353 TRX_family 0.8791	23170 hypothetical protein 0.8785

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Fra10Ac1 superfamily		Folate-sensitive fragile site protein Fra10Ac1; This entry represents the full-length proteins in...	-	90.1299	3.02E-22	65 - 296	superfamily	255511

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_5808	PHATRDRAFT_5808	Not available	127841	45319	Cre07.g336250.t1.2	AT4G15030.1	516391

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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