1038 SPRYD7Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1038	chr_1	SPRYD7	504664	505311	+	SPRYD7

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449738	Thaps1038.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0136	0.28	27 1100

Most Highly Correlated Transcripts

3071 NA 0.9244	264157 CBS_pair superfamily 0.923	20405 GRX_GRXh_1_2_like 0.9227	35956 SIR2 superfamily 0.9207	3564 hypothetical protein 0.9176	21690 hypothetical protein 0.9124
10889 hypothetical protein 0.9117	21722 Aldo_ket_red 0.9094	26769 ERG4_ERG24 superfamily 0.9091	263810 PTZ00430 0.9051

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SPRYD7		SPRY domain-containing protein 7; This family contains SPRY domain-containing protein 7 (also known...	cl02614	125.433	8.09E-36	46 - 214	specific	240460
SPRY superfamily		SPRY domain; SPRY domains, first identified in the SP1A kinase of Dictyostelium and rabbit...	-	125.433	8.09E-36	46 - 214	superfamily	261372

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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