10581 Peptidase_C54 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10581 chr_17 Peptidase_C54 superfamily 129565 131782 + Peptidase_C54 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453121 Thaps10581.2, Thaps10581.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0335

Most Highly Correlated Transcripts

25873

hypothetical protein
0.9

23754

hypothetical protein
0.8979

12836

EEP superfamily
0.8916

263599

COG3899
0.8903

2791

DUF1649 superfamily
0.89

8762

SNF2_N
0.8864

3163

SET
0.8832

262613

PTPA superfamily
0.8825

268194

(Tp_Myb4R1b) SANT
0.8794

21122

Nipped-B_C
0.8786

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C54 superfamily Peptidase family C54; Peptidase family C54. - 141.31 1.09E-37 113 - 561 superfamily 251937

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50253 PHATRDRAFT_50253 171703 189797 Not available Not available Not available 532364

KEGG

KEGG description KEGG Pathway
Regulation of autophagy map04140

GO Terms

GO:0004197 GO:0016946 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0016946

NA

Details: 
NA
GO Category: 
NA

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