263599 COG3899
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263599 chr_9 COG3899 1044755 1049501 + COG3899

Synonyms

NCBI ID Ensembl Genomes exon ID
7450993 Thaps263599.4, Thaps263599.3, Thaps263599.1, Thaps263599.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0474

Most Highly Correlated Transcripts

263610

COG3899
0.9727

24852

hypothetical protein
0.9485

24063

COG3899
0.9402

5660

hypothetical protein
0.9391

20869

hypothetical protein
0.9318

25451

AAA superfamily
0.9281

25600

hypothetical protein
0.9277

25172

hypothetical protein
0.9219

262613

PTPA superfamily
0.9205

23754

hypothetical protein
0.9166

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_16 AAA ATPase domain; This family of domains contain a P-loop motif that is characteristic of the AAA... cl18944 76.3473 1.47E-15 548 - 736 specific 257559
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 76.3473 1.47E-15 548 - 736 superfamily 267297
COG3899 Predicted ATPase [General function prediction only] - 243.074 1.50E-66 549 - 1316 multi-dom 226415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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