10635 COG3217
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10635 chr_17 COG3217 283163 284501 - COG3217

Synonyms

NCBI ID Ensembl Genomes exon ID
7444203 Thaps10635.2, Thaps10635.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0126

Most Highly Correlated Transcripts

12836

EEP superfamily
0.9151

10975

hypothetical protein
0.9134

5641

hypothetical protein
0.9096

24334

EXS superfamily
0.9072

2124

Pan_kinase superfamily
0.9072

3929

Peptidase_C48 superfamily
0.906

25619

hypothetical protein
0.9032

9514

hypothetical protein
0.8999

269276

hypothetical RNA binding protein
0.8986

268825

COG5647
0.8955

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MOSC_N superfamily MOSC N-terminal beta barrel domain; This domain is found to the N-terminus of pfam03473. The... - 76.6263 5.40E-17 74 - 217 superfamily 251986
MOSC superfamily MOSC domain; The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich... - 68.935 3.07E-14 261 - 399 superfamily 251984
COG3217 Uncharacterized Fe-S protein [General function prediction only] - 156.814 1.74E-44 75 - 407 multi-dom 225758

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 223299 311604 63199 Cre09.g389089.t1.2 AT1G30910.1 533387

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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