268825 COG5647
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268825 chr_5 COG5647 274475 277727 + COG5647

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0478

Most Highly Correlated Transcripts

21220

KU superfamily
0.9413

5066

hypothetical protein
0.94

36372

S_TKc
0.9264

27813

Hid1 superfamily
0.9258

3929

Peptidase_C48 superfamily
0.9188

8562

hypothetical protein
0.9155

22138

Sec3_C superfamily
0.9154

25272

Atg14
0.9138

12836

EEP superfamily
0.9133

10934

Adenylation_DNA_ligase_like superfamily
0.9124

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CULLIN superfamily Cullin; Cullin. - 159.793 1.00E-45 375 - 528 superfamily 214545
Cullin_Nedd8 Cullin protein neddylation domain; This is the neddylation site of cullin proteins which are a... cl11186 96.8491 4.75E-24 645 - 710 specific 256057
Cullin_Nedd8 superfamily Cullin protein neddylation domain; This is the neddylation site of cullin proteins which are a... - 96.8491 4.75E-24 645 - 710 superfamily 264267
COG5647 Cullin, a subunit of E3 ubiquitin ligase [Posttranslational modification, protein turnover,... - 291.319 8.65E-87 17 - 716 multi-dom 227934

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44571 PHATRDRAFT_44571 273566 204447 427672 Not available AT5G46210.1 361833

KEGG

KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120

GO Terms

GO:0007049 -

GO:0007049

cell cycle

Details: 
The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
GO Category: 
BP

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