11261 WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11261 chr_19b_31 WD40 superfamily 12131 18848 - WD40 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444358 Thaps11261.3, Thaps11261.2, Thaps11261.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0252

Most Highly Correlated Transcripts

22837

hypothetical protein
0.9255

263997

(APA1) Adaptin_N
0.9254

24035

Peptidase_C19 superfamily
0.9237

12836

EEP superfamily
0.9232

23207

hypothetical protein
0.9218

23582

hypothetical protein
0.9194

25593

hypothetical protein
0.9172

24182

Gryzun
0.9143

22265

hypothetical protein
0.9141

25617

hypothetical protein
0.9135

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 117.051 4.31E-28 1728 - 2052 superfamily 238121
DENN superfamily DENN (AEX-3) domain; DENN (after differentially expressed in neoplastic vs normal cells) is a... - 100.348 3.14E-23 681 - 881 superfamily 264408
COG2319 FOG: WD40 repeat [General function prediction only] - 92.8443 1.55E-19 1727 - 2058 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_39735 PHATRDRAFT_39735 242504 261659 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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