11307 ABC_ATPase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11307 chr_19b_31 ABC_ATPase superfamily 129276 132852 + ABC_ATPase superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0396

Most Highly Correlated Transcripts

bd410

(bd410) HNHc
0.9464

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9366

bd1941

(bd1941) NA
0.9353

16114

PLN02350
0.92

1197

RhaT
0.9144

bd1808

(bd1808) NA
0.9134

15351

PKc_like superfamily
0.9133

5256

hypothetical protein
0.9081

24482

hypothetical protein
0.907

bd1841

(bd1841) CAP10 superfamily
0.9066

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di-... cl14883 93.695 3.83E-21 25 - 237 specific 238287
Lipase superfamily Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and... - 93.695 3.83E-21 25 - 237 superfamily 265473
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 152.705 8.38E-42 394 - 650 superfamily 266551
ABC2_membrane ABC-2 type transporter; ABC-2 type transporter. cl17235 99.6394 3.54E-23 750 - 963 specific 250332
ABC2_membrane superfamily ABC-2 type transporter; ABC-2 type transporter. - 99.6394 3.54E-23 750 - 963 superfamily 266576

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49856 PHATRDRAFT_49856 189569 326112 231118 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0004806 GO:0006629 GO:0016887 GO:0000166 GO:0017111 GO:0003824 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0004806

triglyceride lipase activity

Details: 
Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate.
GO Category: 
MF

GO:0006629

lipid metabolic process

Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO Category: 
BP

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

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