11926 PLAC8Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11926	chr_22	PLAC8	922512	923791	+	PLAC8

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448238	Thaps11926.2, Thaps11926.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0356

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0034	0.54

Most Highly Correlated Transcripts

34191 CobN_like 0.8129	2564 hypothetical protein 0.7911	34647 ARO8 0.7879	20817 hypothetical protein 0.784	22857 hypothetical protein 0.7806	25016 ALDH-SF superfamily 0.7769
4525 hypothetical protein 0.7754	2009 hypothetical protein 0.7745	3230 hypothetical protein 0.7727	10837 Glyco_transf_15 superfamily 0.7722

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLAC8		PLAC8 family; This family includes the Placenta-specific gene 8 protein.	cl04722	68.1389	2.51E-14	233 - 366	specific	252775
PLAC8 superfamily		PLAC8 family; This family includes the Placenta-specific gene 8 protein.	-	68.1389	2.51E-14	233 - 366	superfamily	262267

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	265793	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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