12983 PKc_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
12983 chr_9 PKc_like superfamily 1062242 1064929 - PKc_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450996 Thaps12983.1, Thaps12983.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0481

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0082
 0.46

Most Highly Correlated Transcripts

270222

0.8314

22057

PI-PLCc_At5g67130_like
0.8108

bd735

(bd735) NA
0.7991

bd736

(bd736) NA
0.7913

bd1692

(bd1692) NA
0.7856

13343

Uup
0.7709

21349

COG4857 superfamily
0.7673

bd780

(bd780) NA
0.7659

25095

hypothetical protein
0.7574

262924

PP2Cc
0.7484

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 65.8102 9.49E-13 298 - 399 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 65.8102 9.49E-13 298 - 399 superfamily 260155
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 65.8102 9.49E-13 298 - 399 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 65.8102 9.49E-13 298 - 399 superfamily 260155
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 361.478 1.44E-118 443 - 739 superfamily 263920
PTZ00263 protein kinase A catalytic subunit; Provisional - 292.107 1.65E-91 442 - 764 multi-dom 140289

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004672 GO:0005524 GO:0006468 GO:0004713 GO:0003676 GO:0004522 GO:0004674 -

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0004713

protein tyrosine kinase activity

Details: 
Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
GO Category: 
MF

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

GO:0004522

pancreatic ribonuclease activity

Details: 
Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates.
GO Category: 
MF

GO:0004674

protein serine/threonine kinase activity

Details: 
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
GO Category: 
MF

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