13021 metallo-dependent_hydrolases superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
13021	chr_4	metallo-dependent_hydrolases superfamily	1047896	1050569	-	metallo-dependent_hydrolases superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447947	Thaps13021.3, Thaps13021.2, Thaps13021.4, Thaps13021.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0130

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0171	0.35	0.00000000000001 1200

Most Highly Correlated Transcripts

3260 hypothetical protein 0.9084	39767 TLP_HIUase 0.9025	25224 ATG13 superfamily 0.8963	3456 Peptidase_S41_CPP 0.8952	3922 hypothetical protein 0.8947	20633 Aa_trans superfamily 0.8942
20619 hypothetical protein 0.8787	bd706 (bd706) NA 0.8786	4100 hypothetical protein 0.8768	3167 hypothetical protein 0.8651

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
metallo-dependent_hydrolases superfamily		Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large...	-	570.848	0	266 - 765	superfamily	260323

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_800	PHATR_800	195374	187339	121059	Cre12.g531700.t1.1	AT2G38280.2	564905

KEGG

KEGG description	KEGG Pathway
Biosynthesis of secondary metabolites	map01110

GO Terms

GO:0009168 GO:0019239 GO:0003876 -

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