13326 Choline_transpo
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
13326 chr_5 Choline_transpo 235052 237353 - Choline_transpo
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0325
Normalized Mean Residue
Thaps_bicluster_0076
0.36
(NRT3) 2A0108
0.8906
(bd1934) NA
0.8903
Patatin_and_cPLA2 superfamily
0.8879
WD40 superfamily
0.8789
COG3899
0.8772
(bd1849) NA
0.8745
(bd877) NA
0.8717
(bd643) NA
0.8711
Amidase superfamily
0.87
(bd690) NA
0.8698
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Choline_transpo superfamily Plasma-membrane choline transporter; This family represents a high-affinity plasma-membrane choline... - 232.491 4.50E-70 305 - 630 superfamily 252644
Choline_transpo superfamily Plasma-membrane choline transporter; This family represents a high-affinity plasma-membrane choline... - 232.491 4.50E-70 305 - 630 superfamily 252644
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
37100 Not available Not available Not available Not available Not available AT3G15380.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0001584 GO:0007186 GO:0016021 -

NA

Details: 
NA
GO Category: 
NA

G-protein coupled receptor signaling pathway

Details: 
A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription.
GO Category: 
BP

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC
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