16075 tpt
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
16075 chr_2 tpt 2022475 2023919 - tpt

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps16075.1, Thaps16075.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0013

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0042
 0.43

Most Highly Correlated Transcripts

21487

(Tpt6) hypothetical protein
1

4357

hypothetical protein
0.9339

9776

hypothetical protein
0.9234

8058

hypothetical protein
0.9211

5335

Cyt_b561 superfamily
0.9206

39841

ArsA_ATPase
0.916

21295

YCII superfamily
0.9136

21604

Abhydrolase_3
0.9077

264782

DUF4281
0.9065

264811

DUF389
0.9062

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPT superfamily Triose-phosphate Transporter family; This family includes transporters with a specificity for... - 98.3964 1.29E-24 240 - 389 superfamily 251760
TPT superfamily Triose-phosphate Transporter family; This family includes transporters with a specificity for... - 98.3964 1.29E-24 240 - 389 superfamily 251760
tpt Tpt phosphate/phosphoenolpyruvate translocator; The 6-8 TMS Triose-phosphate Transporter (TPT)... - 214.975 4.45E-66 94 - 392 multi-dom 129898

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 188055 258158 Not available Cre08.g379350.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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