39841 ArsA_ATPase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39841 chr_3 ArsA_ATPase 641579 643128 - ArsA_ATPase

Synonyms

NCBI ID Ensembl Genomes exon ID
7444074 Thaps39841.3, Thaps39841.2, Thaps39841.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0029

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0214
 0.34

Most Highly Correlated Transcripts

38608

SDR_a5
0.9341

16075

tpt
0.916

33868

EHD
0.9124

bd211

(bd211) Maf_Ham1 superfamily
0.9099

268343

NA
0.9086

261882

Thioredoxin_like superfamily
0.907

14192

PLN02449
0.9053

23278

GrpE
0.9033

31751

PKCI_related
0.9022

268911

methyl transferase
0.9015

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell. This ATP-driven... cl17203 206.328 1.28E-64 43 - 316 specific 238992
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 206.328 1.28E-64 43 - 316 superfamily 266552
ArsA_ATPase Anion-transporting ATPase; This Pfam family represents a conserved domain, which is sometimes... - 325.078 9.03E-110 43 - 338 multi-dom 251258

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22896 PHATRDRAFT_22896 276873 68043 Not available Cre03.g204800.t1.2 AT1G01910.4 563420

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0006820 GO:0016020 GO:0015446 GO:0042961 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006820

anion transport

Details: 
The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0015446

arsenite-transmembrane transporting ATPase activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + arsenite(in) = ADP + phosphate + arsenite(out).
GO Category: 
MF

GO:0042961

antimonite-transporting ATPase activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + antimonite(in) = ADP + phosphate + antimonite(out).
GO Category: 
MF

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