16746 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
16746 chr_18 Mito_carr 663666 664777 - Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7444820 Thaps16746.1, Thaps16746.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0288

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

bd1154

(bd1154) tpt
0.9237

bd258

(bd258) HU
0.908

bd463

(bd463) Aa_trans superfamily
0.8911

270139

Aa_trans superfamily
0.8843

3304

(MNT1) NMT1
0.8772

bd1662

(bd1662) TIGR00367
0.8761

bd1645

(bd1645) tpt
0.8721

39710

PTZ00258
0.8685

bd1893

(bd1893) NA
0.8644

bd846

(bd846) NA
0.8632

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 66.1187 6.16E-14 104 - 202 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 66.1187 6.16E-14 104 - 202 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 66.1187 6.16E-14 104 - 202 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 66.1187 6.16E-14 104 - 202 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 66.1187 6.16E-14 104 - 202 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 66.1187 6.16E-14 104 - 202 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 227286 303194 308170 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005215 GO:0005743 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

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