16828 S_TKc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
16828 chr_3 S_TKc 633255 634373 - S_TKc

Synonyms

NCBI ID Ensembl Genomes exon ID
7444071 Thaps16828.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0259

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0083
 0.43

Most Highly Correlated Transcripts

262025

GH18_chitinase-like superfamily
0.9153

6294

hypothetical protein
0.9115

11371

hypothetical protein
0.909

bd763

(bd763) NA
0.9056

12500

SNF2_N
0.9045

12645

MYSc
0.9034

264679

Syja_N
0.889

bd457

(bd457) NA
0.8889

38513

AarF
0.8888

37638

HrpA
0.887

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PKc Catalytic domain of Protein Kinases; Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the... cl09925 153.932 2.42E-44 159 - 372 specific 173623
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 153.932 2.42E-44 159 - 372 superfamily 263920
S_TKc Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-... - 186.196 3.18E-56 157 - 372 multi-dom 214567

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004672 GO:0005524 GO:0006468 GO:0004674 -

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0004674

protein serine/threonine kinase activity

Details: 
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
GO Category: 
MF

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