17511 DUS_like_FMN
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
17511 chr_10 DUS_like_FMN 770429 772321 - DUS_like_FMN

Synonyms

NCBI ID Ensembl Genomes exon ID
7446887 Thaps17511.3, Thaps17511.1, Thaps17511.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0231

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0157
 0.39

Most Highly Correlated Transcripts

bd1945

(bd1945) NA
0.8409

5553

hypothetical protein
0.8389

262079

PP2Cc
0.8387

23568

hypothetical protein
0.8336

7804

MATE_like superfamily
0.8309

33709

RRM_SF superfamily
0.827

263669

UvrD
0.8238

262858

(IKI3) IKI3
0.8187

12943

NARP1
0.8184

1693

hypothetical protein
0.8166

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUS_like_FMN Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the... cl17186 194.635 1.37E-57 122 - 398 specific 239200
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 194.635 1.37E-57 122 - 398 superfamily 266538
Dus Dihydrouridine synthase (Dus); Members of this family catalyse the reduction of the 5,6-double bond... - 157.86 1.62E-43 124 - 481 multi-dom 250444

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_4127 PHATRDRAFT_4127 149964 257233 197126 Cre15.g636896.t1.1 AT3G63510.1 336192

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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