18071 Peptidase_C48 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
18071 chr_11a Peptidase_C48 superfamily 78023 80247 + Peptidase_C48 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452041 Thaps18071.2, Thaps18071.3, Thaps18071.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0315

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0005
 0.39

Most Highly Correlated Transcripts

19158

GRX_PICOT_like
0.8664

16114

PLN02350
0.8648

6376

hypothetical protein
0.8598

24921

HA
0.8597

37118

FeThRed_B
0.8556

13448

Sec1
0.8498

21464

BTB
0.8446

35907

Prp18
0.8442

4898

hypothetical protein
0.8437

40200

TRX_reduct
0.8409

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C48 superfamily Ulp1 protease family, C-terminal catalytic domain; This domain contains the catalytic triad Cys-His... - 157.378 3.12E-41 386 - 677 superfamily 266836

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44818 PHATRDRAFT_44818 180514 257011 463196 Cre16.g692600.t1.1 AT4G15880.1 498310

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008234 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008234

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

Add comment

Log in to post comments