18090 Thioredoxin_like superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
18090	chr_8	Thioredoxin_like superfamily	126588	127457	+	Thioredoxin_like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443449	Thaps18090.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0270

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0041	0.50

Most Highly Correlated Transcripts

11585 CDC27 0.894	36641 Aldolase_Class_I superfamily 0.8664	34306 Thioredoxin_like superfamily 0.8589	40206 UAA 0.8567	9247 hypothetical protein 0.8522	8830 (rfC_1) PLN03025 0.8514
264699 ATS1 0.8385	6964 RING superfamily 0.8335	10683 LSm7 0.8284	10080 hypothetical protein 0.828

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	135.009	2.87E-39	132 - 247	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_13721	PHATRDRAFT_13721	153662	98289	46640	Cre17.g717750.t1.2	AT3G50960.1	483845

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 -

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