18536 Chloroa_b-bind
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
18536 chr_23 Chloroa_b-bind 294315 295181 + Chloroa_b-bind

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps18536.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0019

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0128
 0.43

Most Highly Correlated Transcripts

270220

(FCP_1) hypothetical protein
0.9992

bd1237

(bd1237) 3a01204
0.8434

bd771

(bd771) NA
0.8334

bd630

(bd630) NA
0.8197

bd1097

(bd1097) NA
0.8

bd816

(bd816) NA
0.7927

bd810

(bd810) NA
0.7859

bd692

(bd692) NA
0.7827

bd930

(bd930) HA
0.7751

31875

Pumilio
0.771

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chloroa_b-bind Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. cl02879 69.643 3.87E-15 39 - 174 specific 249913
Chloroa_b-bind superfamily Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. - 69.643 3.87E-15 39 - 174 superfamily 261492

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 221481 264176 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009765 GO:0016020 -

GO:0009765

photosynthesis, light harvesting

Details: 
Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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