1932 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1932 chr_1 HA 2754768 2756178 - HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7453421 Thaps1932.2, Thaps1932.1, Thaps1932.4, Thaps1932.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0121

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0103
 0.42

Most Highly Correlated Transcripts

bd415

(bd415) arom_aa_hydroxylase superfamily
0.969

bd690

(bd690) NA
0.9376

bd1841

(bd1841) CAP10 superfamily
0.9327

bd410

(bd410) HNHc
0.9284

bd643

(bd643) NA
0.9249

bd1934

(bd1934) NA
0.9025

bd1840

(bd1840) NA
0.8958

bd1839

(bd1839) NA
0.8851

bd1756

(bd1756) NA
0.8841

bd737

(bd737) NA
0.8743

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 61.5525 3.24E-12 288 - 351 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 61.5525 3.24E-12 288 - 351 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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