19374 RRM_NCBP2
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
19374 chr_5 RRM_NCBP2 1738040 1738741 + RRM_NCBP2
NCBI ID Ensembl Genomes exon ID
7445210 Thaps19374.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0427
(bd643) NA
0.8928
(bd738) NA
0.8792
(bd690) NA
0.8751
(bd1801) NA
0.8703
(bd877) NA
0.8683
(bd737) NA
0.8207
(CAT1_2) Carn_acyltransf superfamily
0.8202
(bd1934) NA
0.8191
hypothetical protein
0.8175
(Tp_HSF_2.7b) regulator [Rayko]
0.8152
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM_NCBP2 RNA recognition motif found in nuclear cap-binding protein subunit 2 (CBP20) and similar proteins;... cl17169 114.951 1.24E-32 49 - 126 specific 240686
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 114.951 1.24E-32 49 - 126 superfamily 266524
COG0724 RNA-binding proteins (RRM domain) [General function prediction only] - 83.4578 2.23E-19 35 - 134 multi-dom 223796
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_13520 PHATR_13520 163725 300273 47691 Cre10.g437850.t1.1 AT5G44200.2 303573
KEGG description KEGG Pathway
Spliceosome map03040
GO:0003676 -

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF
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