19421 HECT
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
19421 chr_1 HECT 991722 993074 - HECT

Synonyms

NCBI ID Ensembl Genomes exon ID
7445042 Thaps19421.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0410

Most Highly Correlated Transcripts

33759

HECTc
0.9133

38736

S_TKc
0.9069

25187

PI3Kc_like superfamily
0.8888

269724

PP2Cc
0.8853

30701

PRK05279
0.884

15638

SET
0.8824

264321

PP2Cc
0.8809

38472

HA2
0.8805

4938

Methyltransf_6 superfamily
0.8779

37472

CDC39
0.875

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HECT HECT-domain (ubiquitin-transferase); The name HECT comes from Homologous to the E6-AP Carboxyl... cl00077 176.75 2.91E-51 200 - 427 specific 250015
HECTc superfamily HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds... - 176.75 2.91E-51 200 - 427 superfamily 260176
HECTc Domain Homologous to E6-AP Carboxyl Terminus with; E3 ubiquitin-protein ligases. Can bind to E2... - 156.24 2.35E-43 100 - 427 multi-dom 214523

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_52750 PHATRDRAFT_52750 272104 300449 441449 Not available Not available 498805

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004842 GO:0005622 GO:0006464 GO:0006512 -

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0006464

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

GO:0006512

NA

Details: 
NA
GO Category: 
NA

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