bd1472 (bd1472) rpmGThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd1472	bd_37x91	(bd1472) rpmG	12056	12208	+	rpmG

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0044

Most Highly Correlated Transcripts

41211 rpmG 0.9269	41216 PLN00022 0.8929	23415 hypothetical protein 0.8856	bd1787 (bd1787) GLTP 0.8835	23649 GLTP 0.8802	20086 RRM_SF3B14 0.8735
2224 hypothetical protein 0.8694	31510 TIGR00049 0.8629	bd1120 (bd1120) L51_S25_CI-B8 0.8572	36108 hypothetical protein 0.8568

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
rpmG		50S ribosomal protein L33; Validated	cl00383	54.0469	8.10E-12	6 - 48	specific	179075
Ribosomal_L33 superfamily		Ribosomal protein L33; Ribosomal protein L33.	-	54.0469	8.10E-12	6 - 48	superfamily	260395

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Ribosome	map03010

GO Terms

Not available -

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