19626 ZnMc superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
19626 chr_2 ZnMc superfamily 1323067 1324167 - ZnMc superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450408 Thaps19626.2, Thaps19626.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0469

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0115
 0.37

Most Highly Correlated Transcripts

264804

hypothetical protein
0.8945

bd733

(bd733) NA
0.8867

264805

hypothetical protein
0.8641

bd1961

(bd1961) NA
0.848

25048

hypothetical protein
0.8413

bd1844

(bd1844) NA
0.8315

264576

lysozyme_like superfamily
0.8199

269257

Peptidases_S8_Subtilisin_subset
0.8143

264577

lysozyme_like superfamily
0.8115

269439

hypothetical protein
0.8092

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ZnMc superfamily Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches,... - 138.473 3.28E-40 1 - 97 superfamily 260167

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 215150 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008533 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008533

NA

Details: 
NA
GO Category: 
NA

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