20405 GRX_GRXh_1_2_likeThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20405	chr_1	GRX_GRXh_1_2_like	2374305	2374985	-	GRX_GRXh_1_2_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Thaps20405.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0007

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0274	0.39	0.0012 6

Most Highly Correlated Transcripts

270296 hypothetical protein 1	2553 MDR1 0.9576	2597 hypothetical protein 0.9518	5967 hypothetical protein 0.9396	8872 hypothetical protein 0.9387	5957 hypothetical protein 0.9377
264157 CBS_pair superfamily 0.9319	7740 hypothetical protein 0.9265	937 Methyltransf_21 superfamily 0.9263	3384 hypothetical protein 0.9257

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GRX_GRXh_1_2_like		Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins...	cl00388	92.6028	2.87E-24	128 - 198	specific	239511
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	92.6028	2.87E-24	128 - 198	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_51837	PHATRDRAFT_51837	268161	303111	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 GO:0045454 -

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