20452 (RK28) Ribosomal_L28
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
20452 chr_7 (RK28) Ribosomal_L28 1489264 1489641 - Ribosomal_L28
NCBI ID Ensembl Genomes exon ID
7450699 Thaps20452.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0041
Normalized Mean Residue
Thaps_bicluster_0236
0.32
rplO
0.9121
Ribosomal_L10
0.9065
PRK05279
0.9008
SAICAR_synt_Sc
0.8869
Aldolase_II superfamily
0.8791
hypothetical protein
0.8753
Aldolase_Class_I superfamily
0.8696
(RK17) rplQ
0.8675
PRK04173
0.8614
fabG
0.8578
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L28 Ribosomal L28 family; The ribosomal 28 family includes L28 proteins from bacteria and chloroplasts... cl00367 67.1125 7.39E-16 48 - 109 specific 250161
Ribosomal_L28 superfamily Ribosomal L28 family; The ribosomal 28 family includes L28 proteins from bacteria and chloroplasts... - 67.1125 7.39E-16 48 - 109 superfamily 260386
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 234321 256690 Not available Not available AT2G33450.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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