20570 HABP4_PAI-RBP1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20570 chr_1 HABP4_PAI-RBP1 76000 77617 + HABP4_PAI-RBP1

Synonyms

NCBI ID Ensembl Genomes exon ID
7442886 Thaps20570.3, Thaps20570.1, Thaps20570.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0066

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0132
 0.41

Most Highly Correlated Transcripts

bd258

(bd258) HU
0.9445

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9289

bd1652

(bd1652) ABC_ATPase superfamily
0.9267

bd719

(bd719) NA
0.9266

bd1863

(bd1863) NA
0.9224

bd1820

(bd1820) Fasciclin
0.9205

bd1304

(bd1304) Ycf4
0.9061

bd1403

(bd1403) NA
0.9021

bd218

(bd218) Chloroa_b-bind superfamily
0.8986

bd1387

(bd1387) psbE
0.8983

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HABP4_PAI-RBP1 superfamily Hyaluronan / mRNA binding family; This family includes the HABP4 family of hyaluronan-binding... - 66.6698 7.19E-14 126 - 211 superfamily 252793
HABP4_PAI-RBP1 superfamily Hyaluronan / mRNA binding family; This family includes the HABP4 family of hyaluronan-binding... - 66.6698 7.19E-14 126 - 211 superfamily 252793

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40626 PHATRDRAFT_40626 267303 68670 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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