20601 Lactamase_B superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20601	chr_1	Lactamase_B superfamily	273862	275276	+	Lactamase_B superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452522	Thaps20601.1, Thaps20601.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0239

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0279	0.39	0.0000044 0.31

Most Highly Correlated Transcripts

268443 SAICAR_synt_Sc 0.8825	9705 DUF2431 superfamily 0.8814	35049 PRK07411 0.8702	7929 hypothetical protein 0.8696	36007 Aldolase_II superfamily 0.862	261823 FIG superfamily 0.858
2332 PTZ00340 0.8563	31256 TGT superfamily 0.854	268859 (GGTB1) PLN03201 0.8533	7569 hypothetical protein 0.853

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Lactamase_B superfamily		Metallo-beta-lactamase superfamily; Metallo-beta-lactamase superfamily.	-	116.035	6.73E-30	91 - 443	superfamily	260426

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_47617	PHATRDRAFT_47617	182419	148062	426857	Not available	AT1G30300.1	315934

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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