20951 ARM
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20951 chr_1 ARM 2171819 2173999 - ARM

Synonyms

NCBI ID Ensembl Genomes exon ID
7446786 Thaps20951.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0485

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0107
 0.36

Most Highly Correlated Transcripts

bd945

(bd945) COG3899
0.9206

bd954

(bd954) NA
0.9206

7379

(Tp_HSF_2.6d) HSF_DNA-bind superfamily
0.8967

bd1891

(bd1891) COG3899
0.8937

bd739

(bd739) NA
0.8893

bd1802

(bd1802) NA
0.8833

23777

BCAS2 superfamily
0.8528

bd1749

(bd1749) NA
0.8471

25553

hypothetical protein
0.8464

bd824

(bd824) NA
0.8295

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 59.2503 9.67E-11 426 - 548 superfamily 237987
ARM superfamily Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence... - 59.2503 9.67E-11 426 - 548 superfamily 237987

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 311504 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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