23777 BCAS2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23777 chr_8 BCAS2 superfamily 684658 685497 + BCAS2 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449802 Thaps23777.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0485

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0124
 0.37

Most Highly Correlated Transcripts

bd1803

(bd1803) NA
0.953

bd739

(bd739) NA
0.9061

bd1891

(bd1891) COG3899
0.8953

bd1802

(bd1802) NA
0.8944

bd740

(bd740) NA
0.8796

bd1749

(bd1749) NA
0.8643

7379

(Tp_HSF_2.6d) HSF_DNA-bind superfamily
0.861

20951

ARM
0.8528

25553

hypothetical protein
0.8468

bd945

(bd945) COG3899
0.8245

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BCAS2 superfamily Breast carcinoma amplified sequence 2 (BCAS2); This family consists of several eukaryotic sequences... - 63.6353 1.84E-12 22 - 258 superfamily 253334

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Spliceosome map03040

GO Terms

Not available -

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