21082 Cupin_8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21082 chr_1 Cupin_8 superfamily 2907520 2910152 - Cupin_8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452586 Thaps21082.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0220

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0257
 0.20

Most Highly Correlated Transcripts

32374

TPR
0.966

269434

COG1092
0.9594

23862

Syo1_like superfamily
0.9545

20985

COG5593
0.9484

268252

Utp21 superfamily
0.9475

39022

COG2319
0.9475

36434

DUF1253
0.9472

268688

hypothetical protein
0.942

22212

COG5638
0.9409

261462

hypothetical protein
0.9403

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cupin_8 superfamily Cupin-like domain; This cupin like domain shares similarity to the JmjC domain. - 137.876 1.52E-35 403 - 610 superfamily 267658

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14981 PHATRDRAFT_14981 140013 309032 468207 Cre07.g356600.t1.2 Not available 330429

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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