21114 Vac14_Fab1_bd
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21114 chr_2 Vac14_Fab1_bd 173963 179470 + Vac14_Fab1_bd

Synonyms

NCBI ID Ensembl Genomes exon ID
7442194 Thaps21114.3, Thaps21114.2, Thaps21114.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0017

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0267
 0.26

Most Highly Correlated Transcripts

268592

VDE superfamily
0.9099

574

PRK05444
0.8799

261608

PLN02585
0.8752

4363

hypothetical protein
0.875

bd846

(bd846) NA
0.8709

36669

TPT
0.8638

38306

Chloroa_b-bind
0.8632

36235

p450 superfamily
0.8587

17443

IMPase
0.8579

1875

hypothetical protein
0.8566

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Vac14_Fab1_bd superfamily Vacuolar 14 Fab1-binding region; Vac14 is a scaffold for the Fab1 kinase complex, a complex that... - 141.922 8.89E-39 506 - 608 superfamily 257273
Vac14_Fab1_bd superfamily Vacuolar 14 Fab1-binding region; Vac14 is a scaffold for the Fab1 kinase complex, a complex that... - 141.922 8.89E-39 506 - 608 superfamily 257273
Vac14_Fig4_bd superfamily Vacuolar protein 14 C-terminal Fig4p binding; Vac14 is a scaffold for the Fab1 kinase complex, a... - 122.692 5.34E-31 1100 - 1258 superfamily 256722

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43088 PHATRDRAFT_43088 176581 147853 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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