21152 RING
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21152 chr_2 RING 357659 359223 + RING

Synonyms

NCBI ID Ensembl Genomes exon ID
7448637 Thaps21152.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0497

Most Highly Correlated Transcripts

bd1813

(bd1813) NA
0.866

bd877

(bd877) NA
0.8561

bd738

(bd738) NA
0.8541

17865

HemeO
0.8517

bd1801

(bd1801) NA
0.8486

bd895

(bd895) NA
0.8401

270222

0.8335

268976

Peptidase_A22B superfamily
0.8275

bd1802

(bd1802) NA
0.8235

21102

Sulfotransfer_3
0.8186

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... cl17238 60.5372 6.47E-12 357 - 401 specific 238093
RING superfamily RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... - 60.5372 6.47E-12 357 - 401 superfamily 266579

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 165332 241217 Not available Cre11.g476250.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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