21539 EEVS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21539 chr_2 EEVS 2354738 2357081 + EEVS

Synonyms

NCBI ID Ensembl Genomes exon ID
7452916 Thaps21539.4, Thaps21539.3, Thaps21539.1, Thaps21539.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0365

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0059
 0.44

Most Highly Correlated Transcripts

28125

PLN00203
0.8694

bd738

(bd738) NA
0.8684

bd1877

(bd1877) NA
0.8669

bd1801

(bd1801) NA
0.8658

bd1946

(bd1946) NA
0.8573

bd930

(bd930) HA
0.8436

bd1806

(bd1806) AAT_I superfamily
0.8338

24341

DnaJ
0.8321

1791

hypothetical protein
0.831

bd690

(bd690) NA
0.8134

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EEVS 2-epi-5-epi-valiolone synthase (EEVS); 2-epi-5-epi-valiolone synthases catalyze the cyclization of... cl02872 544.924 0 232 - 595 specific 173958
DHQ_Fe-ADH superfamily Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH);... - 544.924 0 232 - 595 superfamily 261488

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8772 PHATRDRAFT_8772 180108 297358 63753 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0003856 GO:0009073 -

GO:0003856

3-dehydroquinate synthase activity

Details: 
Catalysis of the reaction: 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate = 3-dehydroquinate + phosphate.
GO Category: 
MF

GO:0009073

aromatic amino acid family biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
GO Category: 
BP

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