28755 NSA2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
28755 chr_6 NSA2 1563739 1564584 - NSA2

Synonyms

NCBI ID Ensembl Genomes exon ID
7442760 Thaps28755.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0224

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0276
 0.21

Most Highly Correlated Transcripts

21725

Brix superfamily
0.9523

bd1667

(bd1667) Mpp10
0.9456

22498

DEXDc superfamily
0.9366

36406

Ribosomal_L7_archeal_euk
0.9359

14597

SrmB
0.9331

262775

RBFA
0.9324

bd1877

(bd1877) NA
0.9315

21553

Nop16 superfamily
0.9299

22099

hypothetical protein
0.9296

21979

DUF2373 superfamily
0.9287

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NSA2 pre-ribosomal protein NSA2 (Nop seven-associated 2); NSA2 appears to be a protein required for the... cl00880 475.96 3.17E-171 4 - 260 specific 211393
Ribosomal_S8e_like superfamily Eukaryotic/archaeal ribosomal protein S8e and similar proteins; This family contains the eukaryotic... - 475.96 3.17E-171 4 - 260 superfamily 260676

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12394 PHATRDRAFT_12394 268585 302107 96880 Cre12.g507300.t1.2 AT5G06360.1 351148

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005622 -

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

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