21602 NUC173 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21602 chr_3 NUC173 superfamily 138038 146023 + NUC173 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0329

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0189
 0.32

Most Highly Correlated Transcripts

32395

RNA_pol
0.9349

bd1667

(bd1667) Mpp10
0.9039

27873

PLN02274
0.878

36650

hypothetical protein
0.871

22385

SAC3_GANP
0.8605

bd1709

(bd1709) NA
0.8547

28300

dimethyladenosine transferase
0.8431

32414

PRK00093
0.8405

bd1877

(bd1877) NA
0.8291

9818

hypothetical protein
0.8277

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NUC173 superfamily NUC173 domain; This is the central domain of of novel family of hypothetical nucleolar proteins. - 76.872 2.93E-15 691 - 865 superfamily 254639

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42570 PHATRDRAFT_42570 237241 65748 202342 Cre19.g751197.t1.1 AT2G34357.1 344575

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004308 -

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

Add comment

Log in to post comments