32414 PRK00093
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32414 chr_2 PRK00093 333639 335739 + PRK00093

Synonyms

NCBI ID Ensembl Genomes exon ID
7442223 Thaps32414.3, Thaps32414.2, Thaps32414.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0224

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0195
 0.28

Most Highly Correlated Transcripts

bd1667

(bd1667) Mpp10
0.9624

21222

SrmB
0.9381

34027

SrmB
0.9264

32807

DEADc
0.9258

18198

RRM_NIFK_like
0.9257

31465

Brix
0.9212

32395

RNA_pol
0.9199

28300

dimethyladenosine transferase
0.9131

36406

Ribosomal_L7_archeal_euk
0.9126

32325

ABC_ATPase superfamily
0.9125

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EngA2 EngA2 GTPase contains the second domain of EngA; This EngA2 subfamily CD represents the second... cl17170 257.746 3.35E-82 308 - 488 specific 206682
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 210.755 1.37E-64 132 - 296 superfamily 266525
EngA1 EngA1 GTPase contains the first domain of EngA; This EngA1 subfamily CD represents the first GTPase... cl17170 210.755 1.37E-64 132 - 296 specific 206681
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 210.755 1.37E-64 132 - 296 superfamily 266525
KH_dom-like superfamily KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; The KH-like domain at the C-terminus... - 131.399 1.31E-36 495 - 577 superfamily 258851
KH_dom-like superfamily KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; The KH-like domain at the C-terminus... - 131.399 1.31E-36 495 - 577 superfamily 258851
PRK00093 GTP-binding protein Der; Reviewed - 617.447 0 128 - 583 multi-dom 234628

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_17172 PHATRDRAFT_17172 196010 254453 311691 Cre16.g658450.t1.2 AT3G12080.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

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