21622 CBS_pair superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21622 chr_3 CBS_pair superfamily 282846 286510 - CBS_pair superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0335

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0053
 0.56

Most Highly Correlated Transcripts

262616

(MYB22)
0.8787

22442

CHD
0.8754

10753

hypothetical protein
0.872

6922

hypothetical protein
0.8705

8762

SNF2_N
0.8697

11941

hypothetical protein
0.8689

9127

Smc
0.864

10223

hypothetical protein
0.8624

269496

(Tp_TAZ3_PHD1) KAT11 superfamily
0.8618

23992

Rab3-GTPase_cat
0.8613

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 74.5065 6.51E-16 732 - 792 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 74.5065 6.51E-16 732 - 792 superfamily 238008
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 86.8851 9.92E-20 893 - 1030 superfamily 265675

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_36397 PHATRDRAFT_36397 269674 261522 194023 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005509 GO:0003676 -

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

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