21667 (Lhcf7) fucoxanthin chlorophyll a/c light-harvesting protein, major type
Thalassiosira pseudonana

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21667	chr_3	(Lhcf7) fucoxanthin chlorophyll a/c light-harvesting protein, major type	517543	518738	+	fucoxanthin chlorophyll a/c light-harvesting protein, major type

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444046	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0208	0.25	15 20

Most Highly Correlated Transcripts

270222 0.9859	270233 hypothetical protein 0.9841	270241 (Lhcf11) fucoxanthin-chlorophyll a-c binding protein, plastid precursor 0.9787	30385 (Lhcx6_1) Chloroa_b-bind superfamily 0.977	2601 (Lhca2) Chloroa_b-bind 0.9747	42962 (Lhcf5) PLN00120 0.9706
bd1160 (bd1160) Chloroa_b-bind superfamily 0.9702	24080 (Lhcr1) fucoxanthin chl a/c light-harvesting protein, lhcr type 0.9687	268304 hypothetical protein 0.9685	26246 (Lhcr3) fucoxanthin chl a/c light-harvesting protein 0.9683

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
bd1542		Not available	278219	251238	116832	Cre16.g685901.t1.1	AT2G46520.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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