270241 (Lhcf11) fucoxanthin-chlorophyll a-c binding protein, plastid precursor
Thalassiosira pseudonana

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
270241	chr_2	(Lhcf11) fucoxanthin-chlorophyll a-c binding protein, plastid precursor	1997948	1999175	-	fucoxanthin-chlorophyll a-c binding protein, plastid precursor

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452341	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0208	0.25	15 20

Most Highly Correlated Transcripts

bd1160 (bd1160) Chloroa_b-bind superfamily 0.9934	bd1820 (bd1820) Fasciclin 0.9877	268304 hypothetical protein 0.9845	21667 (Lhcf7) fucoxanthin chlorophyll a/c light-harvesting protein, major type 0.9787	30385 (Lhcx6_1) Chloroa_b-bind superfamily 0.9785	2601 (Lhca2) Chloroa_b-bind 0.978
24080 (Lhcr1) fucoxanthin chl a/c light-harvesting protein, lhcr type 0.9762	24769 hypothetical protein 0.9726	268127 (Lhcf9) PLN00120 0.9711	20603 hypothetical protein 0.9706

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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