22138 Sec3_C superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22138 chr_4 Sec3_C superfamily 469693 474236 + Sec3_C superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442098 Thaps22138.2, Thaps22138.3, Thaps22138.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0252

Most Highly Correlated Transcripts

25288

Sec6 superfamily
0.9416

12836

EEP superfamily
0.9379

36372

S_TKc
0.935

8535

hypothetical protein
0.9339

22265

hypothetical protein
0.931

24828

CAP_GLY
0.926

268606

TBCC
0.9239

23450

hypothetical protein
0.9224

23051

hypothetical protein
0.9214

10815

Peptidase_S41_TRI
0.9188

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sec3_C superfamily Exocyst complex component Sec3; This entry is the conserved middle and C-terminus of the Sec3... - 105.88 2.00E-23 740 - 1402 superfamily 268303

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44465 PHATRDRAFT_44465 230915 233676 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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