22170 PCI
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22170 chr_4 PCI 619850 622186 - PCI

Synonyms

NCBI ID Ensembl Genomes exon ID
7452617 Thaps22170.2, Thaps22170.1, Thaps22170.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0229

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0165
 0.36

Most Highly Correlated Transcripts

bd1876

(bd1876) NatB_MDM20 superfamily
0.9172

42213

PLN02286
0.9125

268062

PRK14293
0.9023

268714

TypA_BipA
0.8905

36321

hypothetical protein
0.8875

264345

SpoU
0.8855

269616

PLN03127
0.8797

31929

(GGPS5) Trans_IPPS_HT
0.8777

42226

PLN03233
0.8756

261109

NBD_sugar-kinase_HSP70_actin superfamily
0.8755

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PCI PCI domain; This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15). cl02111 64.1748 1.07E-12 313 - 415 specific 250589
PCI superfamily PCI domain; This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15). - 64.1748 1.07E-12 313 - 415 superfamily 261183

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47027 PHATRDRAFT_47027 175756 305351 226502 Not available AT5G15610.2 360256

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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