22223 Serinc superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22223 chr_4 Serinc superfamily 905943 907596 - Serinc superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453344 Thaps22223.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0482

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0011
 0.46

Most Highly Correlated Transcripts

bd1813

(bd1813) NA
0.9273

bd738

(bd738) NA
0.927

bd1801

(bd1801) NA
0.9248

bd877

(bd877) NA
0.8643

bd690

(bd690) NA
0.8583

23828

hypothetical protein
0.8508

bd737

(bd737) NA
0.8453

bd1802

(bd1802) NA
0.8344

32779

ATP_bind_1
0.8329

21349

COG4857 superfamily
0.8326

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Serinc superfamily Serine incorporator (Serinc); This is a family of eukaryotic membrane proteins which incorporate... - 157.407 1.71E-42 58 - 524 superfamily 251888

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46423 PHATRDRAFT_46423 171748 54752 445379 Cre09.g412803.t1.2 AT3G06170.1 331320

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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