22332 GAT1_Peptidase_E
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22332 chr_4 GAT1_Peptidase_E 1440317 1441700 + GAT1_Peptidase_E

Synonyms

NCBI ID Ensembl Genomes exon ID
7448830 Thaps22332.2, Thaps22332.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0309

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0058
 0.44

Most Highly Correlated Transcripts

bd690

(bd690) NA
0.9174

bd1934

(bd1934) NA
0.8672

bd1959

(bd1959) NA
0.8617

bd737

(bd737) NA
0.8556

bd1806

(bd1806) AAT_I superfamily
0.851

bd1801

(bd1801) NA
0.8505

bd738

(bd738) NA
0.8493

bd643

(bd643) NA
0.8377

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8356

2320

hypothetical protein
0.8228

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E; Type 1 glutamine... cl00020 143.573 1.75E-40 51 - 300 specific 153240
GAT_1 superfamily Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1... - 143.573 1.75E-40 51 - 300 superfamily 260141

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
32325 Not available Not available 162329 315428 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008236 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008236

serine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

Add comment

Log in to post comments