22462 FtsJThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
22462	chr_4	FtsJ	2085957	2087775	-	FtsJ

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452223	Thaps22462.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0224

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0284	0.26	0.16 0.049

Most Highly Correlated Transcripts

22404 DEXDc superfamily 0.9016	23202 RsuA 0.9006	21553 Nop16 superfamily 0.8916	21725 Brix superfamily 0.8873	31465 Brix 0.8864	25484 hypothetical protein 0.8813
bd1807 (bd1807) RRS1 superfamily 0.88	261145 Lactamase_B superfamily 0.8778	34006 Sun 0.8765	18198 RRM_NIFK_like 0.8758

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FtsJ		FtsJ-like methyltransferase; This family consists of FtsJ from various bacterial and archaeal...	cl17430	70.7238	2.89E-14	314 - 447	specific	250820
FtsJ superfamily		FtsJ-like methyltransferase; This family consists of FtsJ from various bacterial and archaeal...	-	70.7238	2.89E-14	314 - 447	superfamily	266678

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_49783	PHATRDRAFT_49783	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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